import pandas as pd
import numpy as np
from PlateAnalysis import PlateDataset
import matplotlib.pyplot as plt
import re


TritonPlate_t1 = PlateDataset('20191127_NormalPlate_triton.CSV')
KPiPlate_t1 = PlateDataset('20191127_NormalPlate_KPi.CSV')
DeltaPlate_t1 = PlateDataset('20191127_Delta_Triton.CSV')

TritonPlate_t2 = PlateDataset('20191127_Normal_Triton_t2.CSV')
KPiPlate_t2 = PlateDataset('20191127_Normal_KPi_t2.CSV')
DeltaPlate_t2 = PlateDataset('20191127_Delta_Triton_t2.CSV')

CompoundMap = dict(zip(range(1,25),['Lauric Acid']*6 + \
                       ['Arachadionic Acid']*6 + \
                       ['Palmitic Acid']*6 + \
                       ['4-Phenylimidazole']*6))


for i in [TritonPlate_t1,TritonPlate_t2, KPiPlate_t1, KPiPlate_t2, DeltaPlate_t1, DeltaPlate_t2]:
    for j in range(1,25):
        
        NormalizedTraces, DifferenceSpec, DiffDiff = i.AnalysisPipeline_1(j)
        print('Plate: {} \t Compound: {}'.format(i.plate_data,CompoundMap[j]))
        i.PlotTrace(NormalizedTraces)
        i.PlotTrace(DifferenceSpec)
        i.PlotMichaelesMenten(DiffDiff,'Plate: {} \t Compound: {}'.format(i.plate_data,CompoundMap[j]))

/home/james/anaconda3/lib/python3.7/site-packages/numpy/core/fromnumeric.py:2389: FutureWarning: Method .ptp is deprecated and will be removed in a future version. Use numpy.ptp instead.
  return ptp(axis=axis, out=out, **kwargs)

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Lauric Acid

/home/james/anaconda3/lib/python3.7/site-packages/matplotlib/backends/backend_agg.py:211: RuntimeWarning: Glyph 9 missing from current font.
  font.set_text(s, 0.0, flags=flags)
/home/james/anaconda3/lib/python3.7/site-packages/matplotlib/backends/backend_agg.py:180: RuntimeWarning: Glyph 9 missing from current font.
  font.set_text(s, 0, flags=flags)

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Lauric Acid

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Lauric Acid

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Lauric Acid

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Lauric Acid

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Lauric Acid

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Arachadionic Acid

Plate: 20191127_NormalPlate_triton.CSV 	 Compound: Arachadionic Acid